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This is my one main complaint about Fedora Linux.
this post was submitted on 06 Feb 2024
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Those updates in Discover are for flatpak, not dnf. You can verify that with
flatpak update.As for discover wanting to restart to do their update, that's a fedora thing for an extra level of safety while updating. You can read about it here.
That shouldn't trigger for flatpaks though. No risk of breaking the system while updating flatpaks